PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00386g00922.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 210aa    MW: 23905.6 Da    PI: 5.8091
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00386g00922.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.4e-1053101555
                               HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                                 + Er RR ++ + +  L++l+P+ +   +s K +   i+ + ++YIk+L+
  Peaxi162Scf00386g00922.1  53 PQIKERERRGKMAEMYTVLQSLVPTlS---NSHKATREKIVAESTDYIKQLE 101
                               5688*********************55...********************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.0348100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.21E-848105No hitNo description
SuperFamilySSF474593.27E-1350127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-1251109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.8E-852101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.1E-754106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5167110.348145210IPR002912ACT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MWQEIMLKEE TEEEEIEKLF MGVMEGYKDS CMPPLTDFCN INNEMACSSK ASPQIKERER  60
RGKMAEMYTV LQSLVPTLSN SHKATREKIV AESTDYIKQL EEEVSRLENL KKSCLGKVLV  120
DKPALSQCRN RVSSVNITVS KGLAFFGIQF QLNQGLMTKI FWVLDKHQAE VLAANISVSE  180
HRLATLTVTV IIGNNDSNTI ENIRRELLLF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009630063.14e-98PREDICTED: uncharacterized protein LOC104120081
RefseqXP_016496901.14e-98PREDICTED: uncharacterized protein LOC107815786
TrEMBLK4AWY31e-91K4AWY3_SOLLC; Uncharacterized protein
STRINGSolyc01g067340.1.13e-91(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA132481415
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09820.13e-06bHLH family protein